Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dppA | dppD | rrnAC3299 | rrnAC2228 | Dipeptide ABC transporter dipeptide-binding. | Dipeptide ABC transporter ATP-binding. | 0.822 |
dppA | hcp2 | rrnAC3299 | rrnAC0508 | Dipeptide ABC transporter dipeptide-binding. | Halocyanin precursor-like protein. | 0.451 |
dppD | dppA | rrnAC2228 | rrnAC3299 | Dipeptide ABC transporter ATP-binding. | Dipeptide ABC transporter dipeptide-binding. | 0.822 |
dppD | hcp2 | rrnAC2228 | rrnAC0508 | Dipeptide ABC transporter ATP-binding. | Halocyanin precursor-like protein. | 0.448 |
fer2 | hcp2 | rrnAC2179 | rrnAC0508 | 2Fe-2S iron-sulfur cluster binding domain. | Halocyanin precursor-like protein. | 0.462 |
fer2 | petB2 | rrnAC2179 | rrnAC1196 | 2Fe-2S iron-sulfur cluster binding domain. | Cytochrome B6. | 0.432 |
fer2 | rrnAC0731 | rrnAC2179 | rrnAC0731 | 2Fe-2S iron-sulfur cluster binding domain. | Cytochrome b(C-terminal)/b6. | 0.482 |
ferA3 | hcp2 | rrnAC0656 | rrnAC0508 | Ferredoxin. | Halocyanin precursor-like protein. | 0.413 |
ferA3 | rrnAC0731 | rrnAC0656 | rrnAC0731 | Ferredoxin. | Cytochrome b(C-terminal)/b6. | 0.420 |
hcp2 | dppA | rrnAC0508 | rrnAC3299 | Halocyanin precursor-like protein. | Dipeptide ABC transporter dipeptide-binding. | 0.451 |
hcp2 | dppD | rrnAC0508 | rrnAC2228 | Halocyanin precursor-like protein. | Dipeptide ABC transporter ATP-binding. | 0.448 |
hcp2 | fer2 | rrnAC0508 | rrnAC2179 | Halocyanin precursor-like protein. | 2Fe-2S iron-sulfur cluster binding domain. | 0.462 |
hcp2 | ferA3 | rrnAC0508 | rrnAC0656 | Halocyanin precursor-like protein. | Ferredoxin. | 0.413 |
hcp2 | pan1a | rrnAC0508 | rrnAC1378 | Halocyanin precursor-like protein. | Membrane protein Pan1. | 0.433 |
hcp2 | petB2 | rrnAC0508 | rrnAC1196 | Halocyanin precursor-like protein. | Cytochrome B6. | 0.423 |
hcp2 | phr2 | rrnAC0508 | rrnAC0506 | Halocyanin precursor-like protein. | Cryptochrome/photolyase. | 0.551 |
hcp2 | rrnAC0355 | rrnAC0508 | rrnAC0355 | Halocyanin precursor-like protein. | Unknown. | 0.450 |
hcp2 | rrnAC0731 | rrnAC0508 | rrnAC0731 | Halocyanin precursor-like protein. | Cytochrome b(C-terminal)/b6. | 0.485 |
hcp2 | rrnAC0910 | rrnAC0508 | rrnAC0910 | Halocyanin precursor-like protein. | Unknown. | 0.426 |
pan1a | hcp2 | rrnAC1378 | rrnAC0508 | Membrane protein Pan1. | Halocyanin precursor-like protein. | 0.433 |
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