STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkH3TRK potassium uptake system protein. (564 aa)    
Predicted Functional Partners:
trkA1
Trk potassium uptake system protein.
 
 
 0.976
mthK
Potassium channel related protein.
 
 
 0.937
nhaC6
Na+/H+ antiporter.
 
 
 0.931
trkA4
Trk potassium uptake system protein.
 
 
 0.860
trkA3
TRK potassium uptake system protein.
 
 
 0.843
trkA7
TRK potassium uptake system protein.
 
 
 0.842
trkA6
TRK potassium uptake system protein.
 
 
 0.824
trkA2
Potassium uptake protein TrkA.
 
   
 0.791
trkA5
Trk potassium uptake system protein.
  
 
 0.650
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.