Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fau-1 | prxS | rrnAC2113 | rrnAC2601 | Unknown; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences. | AhpC/TSA family peroxiredoxins PrxS. | 0.484 |
| fau-1 | recJ4 | rrnAC2113 | rrnAC2217 | Unknown; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences. | RecJ-like exonuclease; DHH/DHHA1 family protein. | 0.674 |
| fau-1 | rrnAC0639 | rrnAC2113 | rrnAC0639 | Unknown; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences. | Acetyltransferase family; GNAT. | 0.580 |
| fau-1 | trmB1 | rrnAC2113 | rrnAC0914 | Unknown; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences. | Sugar-specific transcriptional regulator TrmB. | 0.501 |
| fau-1 | uvrD | rrnAC2113 | rrnAC2267 | Unknown; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences. | Repair helicase. | 0.628 |
| ferB | prxS | rrnAC0089 | rrnAC2601 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | AhpC/TSA family peroxiredoxins PrxS. | 0.582 |
| ferB | recJ4 | rrnAC0089 | rrnAC2217 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | RecJ-like exonuclease; DHH/DHHA1 family protein. | 0.416 |
| ferB | rrnAC0930 | rrnAC0089 | rrnAC0930 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Unknown. | 0.474 |
| ferB | trmB1 | rrnAC0089 | rrnAC0914 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Sugar-specific transcriptional regulator TrmB. | 0.547 |
| ferB | uvrB | rrnAC0089 | rrnAC2901 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Putative uvrB. | 0.443 |
| hpyA | prxS | rrnAC2301 | rrnAC2601 | Archaeal histone A1. | AhpC/TSA family peroxiredoxins PrxS. | 0.518 |
| hpyA | recJ4 | rrnAC2301 | rrnAC2217 | Archaeal histone A1. | RecJ-like exonuclease; DHH/DHHA1 family protein. | 0.453 |
| hpyA | rrnAC0639 | rrnAC2301 | rrnAC0639 | Archaeal histone A1. | Acetyltransferase family; GNAT. | 0.635 |
| hpyA | rrnAC0872 | rrnAC2301 | rrnAC0872 | Archaeal histone A1. | Putative DNA binding domain. | 0.467 |
| hpyA | trmB1 | rrnAC2301 | rrnAC0914 | Archaeal histone A1. | Sugar-specific transcriptional regulator TrmB. | 0.596 |
| hpyA | uvrB | rrnAC2301 | rrnAC2901 | Archaeal histone A1. | Putative uvrB. | 0.693 |
| hpyA | uvrD | rrnAC2301 | rrnAC2267 | Archaeal histone A1. | Repair helicase. | 0.587 |
| prxS | fau-1 | rrnAC2601 | rrnAC2113 | AhpC/TSA family peroxiredoxins PrxS. | Unknown; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences. | 0.484 |
| prxS | ferB | rrnAC2601 | rrnAC0089 | AhpC/TSA family peroxiredoxins PrxS. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.582 |
| prxS | hpyA | rrnAC2601 | rrnAC2301 | AhpC/TSA family peroxiredoxins PrxS. | Archaeal histone A1. | 0.518 |
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