STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htlD-10HTR-like protein; Similar to Escherichia coli protein kinase GP:GI-606149. (663 aa)    
Predicted Functional Partners:
cheY
Chemotaxis protein CheY.
 
 
   0.742
hlx1
HoxA-like transcriptional regulator.
 
 
   0.620
oye-2
Unknown.
 
     0.620
rrnAC0989
Unknown.
       0.569
hlx5
HoxA-like transcriptional regulator.
 
 
   0.551
htrA1
Serine protease HtrA.
  
 0.524
mutY
A/G-specific adenine glycosylase.
  
    0.524
rrnAC2416
Putative light and redox sensing histidine kinase.
 
 
 
0.523
pcnA
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family.
  
  
 0.476
pknA1
Serine/threonine-protein kinase PknA.
  
 
 0.459
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.