STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbB1dTDP-glucose 4-6-dehydratase. (353 aa)    
Predicted Functional Partners:
rffG
dTDP-glucose dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
0.981
rfbB3
DTDP-glucose-46-dehydratase.
  
 
 0.909
rfbB2
DTDP-glucose-46-dehydratase.
  
  
 
0.901
rffH3
Glucose-1-phosphate thymidylyltransferase.
 
 0.867
rfbA
Glucose-1-phosphate thymidylyltransferase.
 
 0.847
rffH2
Glucose-1-phosphate thymidylyltransferase.
 
 0.844
graD4b
Glucose-1-phosphate thymidylyltransferase.
 
 0.841
graD4c
Glucose-1-phosphate thymidylyltransferase.
 
 0.836
rffH1
Glucose-1-phosphate thymidylyltransferase.
 
 0.833
rps3AE
30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.825
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.