STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coxA1Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (594 aa)    
Predicted Functional Partners:
coxC
Cytochrome c oxidase subunit III.
 0.993
cyoC
Cytochrome c oxidase polypeptide III.
 0.991
coxB1
Cytochrome c oxidase subunit II.
 
 0.981
coxB3
Cytochrome c oxidase subunit II.
 
 0.981
coxB4
Cytochrome C oxidase subunit II membrane domain.
 
 0.980
coxB2
Cytochrome c oxidase subunit II.
 
 0.971
ndhD
NADH dehydrogenase subunit 4.
  
 
 0.938
petB1
Cytochrome b6.
 
 
 0.936
ctaB
Heme synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.932
petB2
Cytochrome B6.
 
 
 0.932
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.