STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC1437Unknown. (221 aa)    
Predicted Functional Partners:
taqD
Glycerol-3-phosphate cytidyltransferase.
       0.681
rrnAC1586
Unknown.
  
  
 0.574
rrnAC3236
Sugar transferase involved in lipopolysaccharide synthesis.
  
  
 0.574
rrnAC2803
Unknown.
  
     0.495
yrdC
DNA binding protein.
  
    0.493
rrnAC1439
Unknown.
       0.482
rrnAC0977
Unknown.
 
 
 0.457
pknA2
Serine/threonine protien kinase related protein.
 
   
 0.443
ugd2
UDP-glucose 6-dehydrogenase.
  
  
 0.432
arsC
Putative arsenate reductase.
 
   
 0.414
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.