STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppSUndecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids. (308 aa)    
Predicted Functional Partners:
fps
Farnesyl-pyrrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.958
idsA
Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.955
crtB
Phytoene synthase.
   
 
 0.834
nusA2
Transcription termination factor NusA; Participates in transcription termination. Belongs to the NusA family.
  
    0.750
pyrH
Probable uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.739
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
 
    0.725
rrnAC3170
M50 metallopeptidase.
 
  
 0.697
rrnAC1637
Unknown.
  
  
 0.652
rrnAC3176
Unknown.
  
  
 0.652
rbnBN1
Ribonuclease BN-like.
      
 0.641
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.