STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC1735Unknown. (193 aa)    
Predicted Functional Partners:
rrnAC1737
Unknown.
       0.743
rrnAC1003
Unknown.
 
     0.742
rrnAC2744
Unknown.
  
     0.727
tot
Transmembrane oligosaccharyl transferase.
  
     0.725
rrnAC1165
Unknown; Belongs to the UPF0212 family.
  
     0.723
cinR
Transcription repressor CinR.
  
     0.716
rrnAC0234
Unknown.
  
     0.714
rrnAC0631
Unknown.
  
     0.712
arsR
Transcription regulator.
  
     0.711
rrnAC2460
Unknown.
  
     0.703
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.