STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnp-18Phage integrase/site-specific recombinase. (340 aa)    
Predicted Functional Partners:
rrnAC1837
Unknown.
       0.527
rrnAC3438
Unknown.
  
     0.518
rrnAC0279
Unknown.
  
    0.492
rrnAC2453
Unknown.
  
     0.491
rrnAC3137
Unknown.
  
     0.483
rrnAC1838
Unknown.
       0.471
rrnAC1112
Unknown.
  
     0.468
rrnAC3396
Unknown.
  
   
 0.468
rrnAC3242
Unknown.
  
   
 0.462
rrnAC1281
Unknown.
  
     0.446
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.