Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cadT | cbiA2 | rrnAC1490 | rrnAC1102 | Cobalamin adenosyltransferase. | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.952 |
| cadT | cbiC | rrnAC1490 | rrnAC3020 | Cobalamin adenosyltransferase. | precorrin-8X methylmutase. | 0.597 |
| cadT | cbiF | rrnAC1490 | rrnAC3001 | Cobalamin adenosyltransferase. | Cobalamin biosynthesis precorrin-3 methylase. | 0.472 |
| cadT | cbiL | rrnAC1490 | rrnAC3000 | Cobalamin adenosyltransferase. | Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.447 |
| cadT | cobI | rrnAC1490 | rrnAC1936 | Cobalamin adenosyltransferase. | Cobalamin adenosyltransferase. | 0.962 |
| cadT | cobQ | rrnAC1490 | rrnAC1938 | Cobalamin adenosyltransferase. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.954 |
| cadT | rrnAC1930 | rrnAC1490 | rrnAC1930 | Cobalamin adenosyltransferase. | Putative CobD/Cbib protein. | 0.952 |
| cadT | rrnAC1935 | rrnAC1490 | rrnAC1935 | Cobalamin adenosyltransferase. | Unknown. | 0.958 |
| cbiA2 | cadT | rrnAC1102 | rrnAC1490 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobalamin adenosyltransferase. | 0.952 |
| cbiA2 | cbiC | rrnAC1102 | rrnAC3020 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | precorrin-8X methylmutase. | 0.995 |
| cbiA2 | cbiF | rrnAC1102 | rrnAC3001 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobalamin biosynthesis precorrin-3 methylase. | 0.930 |
| cbiA2 | cbiH | rrnAC1102 | rrnAC3008 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | precorrin-3B C17-methyltransferase. | 0.916 |
| cbiA2 | cbiL | rrnAC1102 | rrnAC3000 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.944 |
| cbiA2 | cobI | rrnAC1102 | rrnAC1936 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobalamin adenosyltransferase. | 0.988 |
| cbiA2 | cobQ | rrnAC1102 | rrnAC1938 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.986 |
| cbiA2 | hisC1 | rrnAC1102 | rrnAC1934 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Histidinol-phosphate aminotransferase. | 0.958 |
| cbiA2 | rrnAC1930 | rrnAC1102 | rrnAC1930 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Putative CobD/Cbib protein. | 0.897 |
| cbiA2 | rrnAC1935 | rrnAC1102 | rrnAC1935 | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Unknown. | 0.457 |
| cbiC | cadT | rrnAC3020 | rrnAC1490 | precorrin-8X methylmutase. | Cobalamin adenosyltransferase. | 0.597 |
| cbiC | cbiA2 | rrnAC3020 | rrnAC1102 | precorrin-8X methylmutase. | Cobyrinic acid ac-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.995 |
page 1 of 6