Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
csg4 | rrnAC2266 | rrnAC0971 | rrnAC2266 | Cell surface glycoprotein related protein; S-layer protein related protein. | Unknown. | 0.435 |
polB1 | rrnAC2266 | rrnAC1831 | rrnAC2266 | DNA polymerase B elongation subunit. | Unknown. | 0.497 |
rpl10E-2 | rrnAC2266 | rrnAC2357 | rrnAC2266 | 50S ribosomal protein L10e; This is 1 of 5 proteins that mediate the attachment of the 5S rRNA onto the large ribosomal subunit, stabilizing the orientation of adjacent RNA domains. Modeling places the A and P site tRNAs in close proximity to this protein. | Unknown. | 0.457 |
rrnAC0682 | rrnAC2266 | rrnAC0682 | rrnAC2266 | Unknown. | Unknown. | 0.442 |
rrnAC1189 | rrnAC1502 | rrnAC1189 | rrnAC1502 | Unknown. | Unknown. | 0.420 |
rrnAC1189 | rrnAC2265 | rrnAC1189 | rrnAC2265 | Unknown. | Unknown; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.499 |
rrnAC1189 | rrnAC2266 | rrnAC1189 | rrnAC2266 | Unknown. | Unknown. | 0.539 |
rrnAC1502 | rrnAC1189 | rrnAC1502 | rrnAC1189 | Unknown. | Unknown. | 0.420 |
rrnAC1502 | rrnAC1808 | rrnAC1502 | rrnAC1808 | Unknown. | Unknown. | 0.425 |
rrnAC1502 | rrnAC2265 | rrnAC1502 | rrnAC2265 | Unknown. | Unknown; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.515 |
rrnAC1502 | rrnAC2266 | rrnAC1502 | rrnAC2266 | Unknown. | Unknown. | 0.534 |
rrnAC1808 | rrnAC1502 | rrnAC1808 | rrnAC1502 | Unknown. | Unknown. | 0.425 |
rrnAC1808 | rrnAC2265 | rrnAC1808 | rrnAC2265 | Unknown. | Unknown; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.457 |
rrnAC1808 | rrnAC2266 | rrnAC1808 | rrnAC2266 | Unknown. | Unknown. | 0.433 |
rrnAC2263 | rrnAC2265 | rrnAC2263 | rrnAC2265 | Unknown. | Unknown; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | 0.584 |
rrnAC2263 | rrnAC2266 | rrnAC2263 | rrnAC2266 | Unknown. | Unknown. | 0.482 |
rrnAC2265 | rrnAC1189 | rrnAC2265 | rrnAC1189 | Unknown; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Unknown. | 0.499 |
rrnAC2265 | rrnAC1502 | rrnAC2265 | rrnAC1502 | Unknown; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Unknown. | 0.515 |
rrnAC2265 | rrnAC1808 | rrnAC2265 | rrnAC1808 | Unknown; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Unknown. | 0.457 |
rrnAC2265 | rrnAC2263 | rrnAC2265 | rrnAC2263 | Unknown; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. | Unknown. | 0.584 |
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