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eef1a protein (Haloarcula marismortui) - STRING interaction network
"eef1a" - Elongation factor 1-alpha in Haloarcula marismortui
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (421 aa)    
Predicted Functional Partners:
rps3P
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (304 aa)
   
 
  0.997
rpl15E
annotation not available (196 aa)
   
 
  0.996
rps10p-1
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (103 aa)
 
 
  0.990
rps7P
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (206 aa)
 
 
  0.989
rps3AE
annotation not available (213 aa)
   
 
  0.988
rpl2P
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (By similarity) (240 aa)
   
 
  0.986
rps9P
annotation not available (132 aa)
 
 
  0.985
rpl14P
50S ribosomal protein L14; Forms part of two intersubunit bridges in the 70S ribosome (By similarity). Binds to 23S rRNA (132 aa)
   
      0.982
rps12P
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (142 aa)
 
 
  0.982
rps4E
annotation not available (234 aa)
   
 
  0.980
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui, Haloarcula marismortui ATCC 43049, Haloarcula marismortui ATCC43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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