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rpl31E protein (Haloarcula marismortui) - STRING interaction network
"rpl31E" - 50S ribosomal protein L31e in Haloarcula marismortui
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl31E50S ribosomal protein L31e; Binds to the 23S rRNA. Located at the polypeptide exit tunnel on the outside of the subunit (92 aa)    
Predicted Functional Partners:
rpl21E
50S ribosomal protein L21e; This is one of 5 proteins that mediate the attachment of the 5S rRNA onto the large ribosomal subunit, stabilizing the orientation of adjacent RNA domains (96 aa)
 
 
  0.999
rpl44E
50S ribosomal protein L44e; Binds to the 23S rRNA. Binds deacetylated tRNA in the E site; when the tRNA binds a stretch of 7 amino acids are displaced to allow binding (92 aa)
   
 
  0.999
rpl32E
50S ribosomal protein L32e; Binds to the 23S rRNA (241 aa)
   
 
  0.999
rpl15E
annotation not available (196 aa)
     
 
  0.999
rpl19E
50S ribosomal protein L19e; Binds to the 23S rRNA. Located at the polypeptide exit tunnel on the outside of the subunit (149 aa)
     
 
  0.999
rpl40E
annotation not available (49 aa)
   
 
  0.999
rps24E
annotation not available (102 aa)
   
 
  0.999
rps27E
annotation not available (57 aa)
 
 
  0.999
rps19E
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (153 aa)
   
 
  0.999
rpl37AE
50S ribosomal protein L37Ae; Binds to the 23S rRNA (116 aa)
     
 
  0.999
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui, Haloarcula marismortui ATCC 43049, Haloarcula marismortui ATCC43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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