Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| eif2A | eif2G | rrnAC3512 | rrnAC2827 | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Translation initiation factor eIF-2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.998 |
| eif2A | gbp2 | rrnAC3512 | rrnAC1619 | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | GTP-binding protein-like. | 0.979 |
| eif2A | rfbB1 | rrnAC3512 | rrnAC1010 | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | dTDP-glucose 4-6-dehydratase. | 0.410 |
| eif2A | rfbB2 | rrnAC3512 | rrnAC1572 | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | DTDP-glucose-46-dehydratase. | 0.410 |
| eif2A | rffG | rrnAC3512 | rrnAC1011 | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | dTDP-glucose dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. | 0.410 |
| eif2A | rffH3 | rrnAC3512 | rrnAC3238 | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | Glucose-1-phosphate thymidylyltransferase. | 0.853 |
| eif2G | eif2A | rrnAC2827 | rrnAC3512 | Translation initiation factor eIF-2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | 0.998 |
| eif2G | rffH3 | rrnAC2827 | rrnAC3238 | Translation initiation factor eIF-2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | Glucose-1-phosphate thymidylyltransferase. | 0.777 |
| gbp2 | eif2A | rrnAC1619 | rrnAC3512 | GTP-binding protein-like. | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | 0.979 |
| gbp2 | rffH3 | rrnAC1619 | rrnAC3238 | GTP-binding protein-like. | Glucose-1-phosphate thymidylyltransferase. | 0.803 |
| gtr-2 | lpg3 | rrnAC0421 | rrnAC0429 | Predicted glycosyltransferase. | LPS glycosyltransferase. | 0.882 |
| gtr-2 | rffH3 | rrnAC0421 | rrnAC3238 | Predicted glycosyltransferase. | Glucose-1-phosphate thymidylyltransferase. | 0.776 |
| gtr-2 | ugd2 | rrnAC0421 | rrnAC3239 | Predicted glycosyltransferase. | UDP-glucose 6-dehydrogenase. | 0.894 |
| lpg3 | gtr-2 | rrnAC0429 | rrnAC0421 | LPS glycosyltransferase. | Predicted glycosyltransferase. | 0.882 |
| lpg3 | rfbB1 | rrnAC0429 | rrnAC1010 | LPS glycosyltransferase. | dTDP-glucose 4-6-dehydratase. | 0.435 |
| lpg3 | rfbB2 | rrnAC0429 | rrnAC1572 | LPS glycosyltransferase. | DTDP-glucose-46-dehydratase. | 0.447 |
| lpg3 | rffH3 | rrnAC0429 | rrnAC3238 | LPS glycosyltransferase. | Glucose-1-phosphate thymidylyltransferase. | 0.777 |
| lpg3 | ugd2 | rrnAC0429 | rrnAC3239 | LPS glycosyltransferase. | UDP-glucose 6-dehydrogenase. | 0.898 |
| manB3 | rffH3 | rrnAC2522 | rrnAC3238 | Phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family. | Glucose-1-phosphate thymidylyltransferase. | 0.958 |
| rfbB1 | eif2A | rrnAC1010 | rrnAC3512 | dTDP-glucose 4-6-dehydratase. | Probable translation initiation factor 2 alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | 0.410 |
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