STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC3263Unknown. (358 aa)    
Predicted Functional Partners:
tgt-2
Archaeosine tRNA-ribosyltransferase.
 
     0.900
rrnAC1064
Unknown; Belongs to the UPF0179 family.
  
     0.738
rrnAC1820
Unknown.
  
     0.716
rrnAC2519
Putative DNA binding protein.
  
     0.707
rpl40E
50S ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
     0.701
rrnAC3262
Unknown.
       0.692
tatD
TatD related DNase.
  
     0.682
mptD
Unknown; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.677
rpaA
Replication protein A.
  
     0.664
rrnAC1282
Unknown.
  
     0.659
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
Server load: low (26%) [HD]