STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC3526Unknown. (156 aa)    
Predicted Functional Partners:
rrnAC3205
PRC-barrel domain posible photosystem reaction centre subunit H.
  
     0.737
sec11a
Signal sequence peptidase.
  
     0.723
rrnAC2085
Unknown.
  
     0.716
rrnAC1249
Unknown.
 
   
 0.715
rrnAC0234
Unknown.
  
     0.713
secE
Protein translocase SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.711
sec11b
Signal sequence peptidase.
  
     0.711
rrnAC2877
Unknown.
  
     0.704
rrnAC0039
Unknown.
  
     0.699
rrnAC0743
Putative PRC-barrel domain.
  
     0.697
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.