STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdhB2Pyruvate dehydrogenase. (338 aa)    
Predicted Functional Partners:
pdhA1
Pyruvate dehydrogenase E1 component alpha subunit.
 0.999
pdhA3
Pyruvate dehydrogenase E1 component alpha subunit.
 0.999
pdhC1
Dihydrolipoamide S-acetyltransferase component of pyruvate dehydrogenase complex E2.
 0.999
pdhA2
Pyruvate dehydrogenase E1 component alpha subunit.
 0.999
pdhC2
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.998
lpdA3
Dihydrolipoamide dehydrogenase.
 
 0.998
lpdA2
Dihydrolipoamide dehydrogenase.
 
 0.995
lpdA1
Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
 0.955
prsA
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
 0.951
pykA
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.926
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.