STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybiHPutative transcriptional regulator. (219 aa)    
Predicted Functional Partners:
ybhG
Hypothetical protein.
 
  
 0.880
ybhF
Putative ATP-binding component of a transport system.
 
    0.835
ybhS
Putative transport protein (ABC superfamily, membrane).
 
  
 0.827
yieP
Putative transcriptional regulator.
  
  
 0.693
ybhR
Putative transport protein (ABC superfamily, membrane).
 
  
 0.675
yjdC
Putative regulator (TetR/AcrR family).
  
   
 0.621
ydcZ
Putative transport protein.
  
     0.598
KPN_00825
Putative bacterial regulatory protein, LysR; Belongs to the LysR transcriptional regulatory family.
   
   0.592
ybjK
Putative DEOR-type transcriptional regulator.
  
  
 0.587
ydcK
Putative LpxA-like enzyme.
  
     0.576
Your Current Organism:
Klebsiella pneumoniae MGH78578
NCBI taxonomy Id: 272620
Other names: K. pneumoniae subsp. pneumoniae MGH 78578, Klebsiella pneumoniae MCG 78578, Klebsiella pneumoniae str. MCG 78578, Klebsiella pneumoniae subsp. pneumoniae ATCC 700721, Klebsiella pneumoniae subsp. pneumoniae MGH 78578, Klebsiella pneumoniae subsp. pneumoniae str. MGH 78578, Klebsiella pneumoniae subsp. pneumoniae strain MGH 78578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.