Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPN_00899 | KPN_01163 | KPN_00899 | KPN_01163 | Hypothetical protein. | Putative sensor kinase. | 0.951 |
KPN_00899 | KPN_01598 | KPN_00899 | KPN_01598 | Hypothetical protein. | Hypothetical protein. | 0.878 |
KPN_00899 | KPN_01677 | KPN_00899 | KPN_01677 | Hypothetical protein. | Hypothetical protein. | 0.958 |
KPN_00899 | KPN_01794 | KPN_00899 | KPN_01794 | Hypothetical protein. | Hypothetical protein. | 0.644 |
KPN_00899 | KPN_01980 | KPN_00899 | KPN_01980 | Hypothetical protein. | Hypothetical protein. | 0.560 |
KPN_00899 | KPN_02450 | KPN_00899 | KPN_02450 | Hypothetical protein. | Hypothetical protein. | 0.929 |
KPN_00899 | arcB | KPN_00899 | KPN_03619 | Hypothetical protein. | Aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA. | 0.999 |
KPN_00899 | ycdT | KPN_00899 | KPN_04822 | Hypothetical protein. | Putative transmembrane protein. | 0.533 |
KPN_00899 | yeaP | KPN_00899 | KPN_01172 | Hypothetical protein. | Hypothetical protein. | 0.892 |
KPN_00899 | yneF | KPN_00899 | KPN_01638 | Hypothetical protein. | Putative transport protein. | 0.574 |
KPN_01163 | KPN_00899 | KPN_01163 | KPN_00899 | Putative sensor kinase. | Hypothetical protein. | 0.951 |
KPN_01163 | KPN_01598 | KPN_01163 | KPN_01598 | Putative sensor kinase. | Hypothetical protein. | 0.812 |
KPN_01163 | KPN_01677 | KPN_01163 | KPN_01677 | Putative sensor kinase. | Hypothetical protein. | 0.931 |
KPN_01163 | KPN_01794 | KPN_01163 | KPN_01794 | Putative sensor kinase. | Hypothetical protein. | 0.470 |
KPN_01163 | KPN_01980 | KPN_01163 | KPN_01980 | Putative sensor kinase. | Hypothetical protein. | 0.400 |
KPN_01163 | KPN_02450 | KPN_01163 | KPN_02450 | Putative sensor kinase. | Hypothetical protein. | 0.854 |
KPN_01163 | arcB | KPN_01163 | KPN_03619 | Putative sensor kinase. | Aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA. | 0.982 |
KPN_01163 | yeaP | KPN_01163 | KPN_01172 | Putative sensor kinase. | Hypothetical protein. | 0.870 |
KPN_01163 | yneF | KPN_01163 | KPN_01638 | Putative sensor kinase. | Putative transport protein. | 0.406 |
KPN_01598 | KPN_00899 | KPN_01598 | KPN_00899 | Hypothetical protein. | Hypothetical protein. | 0.878 |
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