STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPN_02027Putative transcriptional regulator (LysR family); Belongs to the LysR transcriptional regulatory family. (311 aa)    
Predicted Functional Partners:
KPN_03083
Putative transcriptional regulator LYSR-type; Belongs to the LysR transcriptional regulatory family.
  
     0.714
KPN_04238
Putative transcriptional regulator (LysR family); Belongs to the LysR transcriptional regulatory family.
  
     0.712
KPN_01188
Putative transcriptional regulator (LysR family); Belongs to the LysR transcriptional regulatory family.
  
     0.687
KPN_01685
Putative bacterial regulatory protein, LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.661
KPN_02034
Transcriptional regulator lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.652
oxyR
Activator, hydrogen peroxide-inducible genes; Belongs to the LysR transcriptional regulatory family.
  
     0.649
KPN_02171
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.618
KPN_01662
Putative bacterial regulatory protein, LysR; Belongs to the LysR transcriptional regulatory family.
  
    0.608
ydcI
Putative transcriptional regulator (LysR familiy); Belongs to the LysR transcriptional regulatory family.
  
     0.605
tdcA
Transcriptional activator for amino acids degradation (LysR family); Belongs to the LysR transcriptional regulatory family.
  
     0.592
Your Current Organism:
Klebsiella pneumoniae MGH78578
NCBI taxonomy Id: 272620
Other names: K. pneumoniae subsp. pneumoniae MGH 78578, Klebsiella pneumoniae MCG 78578, Klebsiella pneumoniae str. MCG 78578, Klebsiella pneumoniae subsp. pneumoniae ATCC 700721, Klebsiella pneumoniae subsp. pneumoniae MGH 78578, Klebsiella pneumoniae subsp. pneumoniae str. MGH 78578, Klebsiella pneumoniae subsp. pneumoniae strain MGH 78578
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