STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrbEPutative transport protein (ABC superfamily, membrane). (260 aa)    
Predicted Functional Partners:
yrbD
Putative transport protein (ABC superfamily, peri_bind).
 
 0.999
yrbF
Putative ATP-binding component of a transport system.
 
 0.999
yrbC
Putative transport protein (ABC superfamily, atp_bind and membrane).
 
 
 0.966
yrbB
Hypothetical protein.
  
 0.951
yhbG
Putative ATP-binding component of a transport system.
 
  
  0.772
vacJ
Lipoprotein precursor.
 
   
 0.706
KPN_04750
Putative ABC-type multidrug transport system, ATPase component; Permease component of an ABC-transporter.
    
 0.681
mdlA
ATP-binding component of a transport system.
  
 
 0.674
mdlB
Putative ATP-binding component of a transport system.
  
 
 0.674
msbA
ATP-binding transport protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
 0.674
Your Current Organism:
Klebsiella pneumoniae MGH78578
NCBI taxonomy Id: 272620
Other names: K. pneumoniae subsp. pneumoniae MGH 78578, Klebsiella pneumoniae MCG 78578, Klebsiella pneumoniae str. MCG 78578, Klebsiella pneumoniae subsp. pneumoniae ATCC 700721, Klebsiella pneumoniae subsp. pneumoniae MGH 78578, Klebsiella pneumoniae subsp. pneumoniae str. MGH 78578, Klebsiella pneumoniae subsp. pneumoniae strain MGH 78578
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