Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPN_02219 | KPN_02220 | KPN_02219 | KPN_02220 | Putative nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Putative nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.993 |
KPN_02219 | KPN_04592 | KPN_02219 | KPN_04592 | Putative nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Hypothetical protein. | 0.418 |
KPN_02220 | KPN_02219 | KPN_02220 | KPN_02219 | Putative nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Putative nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.993 |
KPN_02220 | KPN_04592 | KPN_02220 | KPN_04592 | Putative nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Hypothetical protein. | 0.501 |
KPN_04592 | KPN_02219 | KPN_04592 | KPN_02219 | Hypothetical protein. | Putative nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.418 |
KPN_04592 | KPN_02220 | KPN_04592 | KPN_02220 | Hypothetical protein. | Putative nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.501 |
KPN_04592 | aas | KPN_04592 | KPN_03245 | Hypothetical protein. | 2-acyl-glycerophospho-ethanolamine acyltransferase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1. | 0.404 |
KPN_04592 | metH-2 | KPN_04592 | KPN_04399 | Hypothetical protein. | B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.503 |
KPN_04592 | pheA | KPN_04592 | KPN_02920 | Hypothetical protein. | Bifunctional chorismate mutase P/prephenate dehydratase. | 0.420 |
KPN_04592 | yjfY | KPN_04592 | KPN_04593 | Hypothetical protein. | Hypothetical protein. | 0.477 |
aas | KPN_04592 | KPN_03245 | KPN_04592 | 2-acyl-glycerophospho-ethanolamine acyltransferase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1. | Hypothetical protein. | 0.404 |
aas | pheA | KPN_03245 | KPN_02920 | 2-acyl-glycerophospho-ethanolamine acyltransferase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1. | Bifunctional chorismate mutase P/prephenate dehydratase. | 0.558 |
metH-2 | KPN_04592 | KPN_04399 | KPN_04592 | B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hypothetical protein. | 0.503 |
pheA | KPN_04592 | KPN_02920 | KPN_04592 | Bifunctional chorismate mutase P/prephenate dehydratase. | Hypothetical protein. | 0.420 |
pheA | aas | KPN_02920 | KPN_03245 | Bifunctional chorismate mutase P/prephenate dehydratase. | 2-acyl-glycerophospho-ethanolamine acyltransferase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1. | 0.558 |
yjfY | KPN_04592 | KPN_04593 | KPN_04592 | Hypothetical protein. | Hypothetical protein. | 0.477 |