STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPN_04868Putative prophage baseplate assembly protein. (302 aa)    
Predicted Functional Partners:
KPN_04867
Putative prophage tail protein.
 
 
 0.996
KPN_04869
Putative prophage baseplate protein.
 
 
 0.996
KPN_04870
Putative prophage baseplate assembly protein.
 
  
 0.991
KPN_04859
Putative prophage tail protein.
 
 
 0.990
KPN_04863
Putative prophage tail tube protein.
 
 
 0.988
KPN_04864
Putative prophage tail sheath.
 
   0.987
KPN_04877
Putative prophage tail component protein.
 
 
 0.987
KPN_04858
Putative prophage tail protein.
 
  
 0.972
KPN_04865
Putative prophage tail fibre protein.
 
  
 0.971
KPN_04862
Putative prophage tail protein.
 
    0.967
Your Current Organism:
Klebsiella pneumoniae MGH78578
NCBI taxonomy Id: 272620
Other names: K. pneumoniae subsp. pneumoniae MGH 78578, Klebsiella pneumoniae MCG 78578, Klebsiella pneumoniae str. MCG 78578, Klebsiella pneumoniae subsp. pneumoniae ATCC 700721, Klebsiella pneumoniae subsp. pneumoniae MGH 78578, Klebsiella pneumoniae subsp. pneumoniae str. MGH 78578, Klebsiella pneumoniae subsp. pneumoniae strain MGH 78578
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