STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0120Hypothetical protein. (308 aa)    
Predicted Functional Partners:
LBA0119
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
       0.785
LBA0839
Competence protein; ComEC.
  
     0.689
LBA0157
Hypothetical protein.
  
     0.664
LBA1760
Hypothetical protein.
  
     0.584
LBA0121
Putative ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.578
LBA1823
Hypothetical protein.
  
     0.542
LBA0156
Hypothetical protein.
  
     0.536
LBA0207
Hypothetical protein.
  
     0.526
LBA0824
Hypothetical protein; COG0457 FOG TPR repeat.
  
    0.511
vanZ
Putative membrane protein; VanZ.
  
     0.510
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.