Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LBA0127 | LBA0128 | Transposase. | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | 0.566 |
LBA0127 | LBA0129 | Transposase. | Hypothetical protein. | 0.442 |
LBA0128 | LBA0127 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Transposase. | 0.566 |
LBA0128 | LBA0129 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Hypothetical protein. | 0.973 |
LBA0128 | LBA0130 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Hypothetical protein; ATP-dependent DNA helicase RecG. | 0.971 |
LBA0128 | LBA0476 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Prophage Lp2 protein 4. | 0.605 |
LBA0128 | LBA0478 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Methylase. | 0.498 |
LBA0128 | LBA1084 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | COG2910 putative NADH-flavin reductase. | 0.469 |
LBA0128 | LBA1271 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Hypothetical protein; COG4123 Predicted O-methyltransferase. | 0.418 |
LBA0128 | LBA1388 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | 0.469 |
LBA0128 | LBA1404 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Oxidoreductase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | 0.469 |
LBA0128 | LBA1740 | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | Putative membrane protein. | 0.615 |
LBA0129 | LBA0127 | Hypothetical protein. | Transposase. | 0.442 |
LBA0129 | LBA0128 | Hypothetical protein. | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | 0.973 |
LBA0129 | LBA0130 | Hypothetical protein. | Hypothetical protein; ATP-dependent DNA helicase RecG. | 0.987 |
LBA0129 | LBA1740 | Hypothetical protein. | Putative membrane protein. | 0.621 |
LBA0130 | LBA0128 | Hypothetical protein; ATP-dependent DNA helicase RecG. | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | 0.971 |
LBA0130 | LBA0129 | Hypothetical protein; ATP-dependent DNA helicase RecG. | Hypothetical protein. | 0.987 |
LBA0476 | LBA0128 | Prophage Lp2 protein 4. | Hypothetical protein; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain. | 0.605 |
LBA0476 | LBA0478 | Prophage Lp2 protein 4. | Methylase. | 0.809 |
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