STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0146PTS system IIA. (162 aa)    
Predicted Functional Partners:
ptsH
Phosphocarrier protein HPr; PthP; COG1925 Phosphotransferase system, HPr-related protein.
  
 
 0.932
fruA
PTS system, fructose-specific enzyme II.
  
  
 0.768
manL
Mannose-specific PTS system component IIAB.
 
  
 0.652
LBA1705
Sucrose PTS, EIIBC.
 
  
 0.652
fruK
Fructose-1-phosphate kinase; FruK; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.634
scrA
Sucrose PTS transporter.
  
  
 0.606
LBA0725
COG1263 Phosphotransferase system IIC components, glucose-maltose-N-acetylglucosamine-specific.
  
  
 0.606
treB
Trehalose PTS II ABC; COG1263 Phosphotransferase system IIC components, glucose-maltose-N-acetylglucosamine-specific.
  
  
 0.606
LBA1478
PTS enzyme IIABC.
  
  
 0.606
LBA1707
Beta-glucoside permease.
  
  
 0.606
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.