STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slpBS-layer; The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria. (457 aa)    
Predicted Functional Partners:
LBA1029
Putative surface layer protein.
      
 0.755
LBA0170
Putative 6-pyruvoyl-tetrahydropterin synthase.
     
 0.753
LBA0171
Glycosyltransferase.
     
 0.753
LBA0173
Uncharacterized conserved membrane protein.
     
 0.753
slpX
SlpX.
      
0.572
lspA
Lipoprotein signal peptidase A; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
      
 0.531
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
      
 0.529
LBA0447
Phosphoglycerol transferase.
      
 0.528
LBA1377
Putative mucus binding protein precursor.
      
 0.526
purR
Repressor; PurR.
      
 0.472
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.