STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0226Transcriptional regulator. (238 aa)    
Predicted Functional Partners:
LBA0227
Cellobiose-specific PTS IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.627
LBA0225
6-p-beta-glucosidase; 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
    0.532
LBA1705
Sucrose PTS, EIIBC.
 
  
 0.525
fruA
PTS system, fructose-specific enzyme II.
     
 0.517
rplL
50S ribosomal protein L7-L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
  
    0.484
LBA0228
Transcriptional regulator.
  
  
 0.467
scrA
Sucrose PTS transporter.
  
  
 0.463
LBA0725
COG1263 Phosphotransferase system IIC components, glucose-maltose-N-acetylglucosamine-specific.
  
  
 0.463
treB
Trehalose PTS II ABC; COG1263 Phosphotransferase system IIC components, glucose-maltose-N-acetylglucosamine-specific.
  
  
 0.463
LBA1478
PTS enzyme IIABC.
  
  
 0.463
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.