STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA03422',3'-cyclic nucleotide. (311 aa)    
Predicted Functional Partners:
plsY1
Hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
   
 0.857
LBA0044
Putative esterase.
      
 0.830
LBA1852
Putative d-ala,d-ala ligase.
      
 0.830
LBA0109
Hypothetical protein; COG1403 Restriction endonuclease.
 
     0.775
LBA0167
Hypothetical protein.
  
     0.773
LBA0844
Hypothetical protein.
  
     0.773
LBA1830
Hypothetical protein.
 
     0.771
tetR
COG1309 transcriptional regulator, TetR family.
  
     0.770
LBA0207
Hypothetical protein.
  
     0.766
LBA0157
Hypothetical protein.
  
     0.749
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.