STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scrBSucrose-6-p hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (485 aa)    
Predicted Functional Partners:
scrA
Sucrose PTS transporter.
 
 0.997
LBA1705
Sucrose PTS, EIIBC.
 
 
 0.974
scrR
Sucrose operon transcriptional repressor.
 
  
 0.966
gtfA
Sucrose phosphorylase; GtfA.
  
 
 0.964
LBA1437
Sucrose phosphorylase.
  
 
 0.959
LBA0016
Fructokinase; COG1940 transcriptional regulator-sugar kinase.
 
 
 0.953
melA
Alpha-galactosidase; Hydrolyzes the short-chain alpha-galactosaccharide raffinose. Belongs to the glycosyl hydrolase 36 family.
 
  
 0.948
bfrA
Fructosidase; BfrA.
  
  
0.933
bglH
Beta-glucosidase; BglH; similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.926
LBA1872
Oligo-1,6-glucosidase; COG0366 Glycosidases.
  
 
 0.918
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.