STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0437COG4478 Predicted membrane protein. (202 aa)    
Predicted Functional Partners:
LBA0436
N-acetylglucosamine catabolic protein.
  
    0.926
LBA0435
Hypothetical protein.
  
    0.869
LBA0434
Putative UDP-sugar hydrolase; Belongs to the 5'-nucleotidase family.
       0.863
LBA0433
Hypothetical protein.
       0.855
LBA0432
COG0584 Glycerophosphoryl diester phosphodiesterase.
       0.577
LBA1823
Hypothetical protein.
  
     0.539
yycH
Hypothetical protein.
  
     0.526
LBA0821
Hypothetical protein.
  
     0.517
fruA
PTS system, fructose-specific enzyme II.
       0.485
LBA1526
Hypothetical protein.
  
     0.463
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.