STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0497Hypothetical protein. (219 aa)    
Predicted Functional Partners:
LBA0498
Glycerophosphoryl diester phosphodiesterase.
       0.771
LBA0494
Putative surface exclusion protein.
 
     0.737
LBA0337
Hypothetical protein; 2-haloalkanoic acid dehalogenase.
 
     0.716
LBA1194
Putative enterolysin A; Potential frameshift to 1195.
 
    0.701
LBA0650
Hypothetical protein.
 
     0.673
LBA1001
Putative trp repressor binding protein.
 
     0.638
LBA0496
Putative phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
     
 0.610
LBA0495
Putative phosphoglycerate mutase.
     
 0.591
LBA1184
Hypothetical protein.
  
     0.590
LBA1207
Putative enterolysin A.
 
    0.581
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.