STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0498Glycerophosphoryl diester phosphodiesterase. (99 aa)    
Predicted Functional Partners:
LBA0497
Hypothetical protein.
       0.771
LBA0495
Putative phosphoglycerate mutase.
  
    0.584
LBA0496
Putative phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
    0.584
LBA0494
Putative surface exclusion protein.
  
    0.572
glpF
Glycerol uptake facilitator protein; GlpF; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.540
glpF-2
Glycerol uptake facilitator protein; GlpF; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.540
glpK
Glycerol kinase; GlpK.
  
  
 0.519
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.519
adhE
COG1012 NAD-dependent aldehyde dehydrogenases; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.469
LBA0363
Abc transporter permease.
  
  
 0.434
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.