STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0599Transcriptional regulator. (254 aa)    
Predicted Functional Partners:
fruA
PTS system, fructose-specific enzyme II.
 
  
 0.915
LBA0598
Hypothetical protein.
       0.778
fruK
Fructose-1-phosphate kinase; FruK; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.773
LBA0702
HAD superfamily hydrolase.
 
    0.580
fabG
3-oxoacyl-(acyl-carrier protein) reductase; FabG.
  
  
 0.538
LBA1098
Glucose 1-dehydrogenase; Adh_short, short chain dehydrogenase.
  
  
 0.538
adhE
COG1012 NAD-dependent aldehyde dehydrogenases; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.473
LBA0600
Xylulose-5-phosphate-fructose phosphoketolase.
       0.435
ssdh
SsdH; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
  
 0.425
LBA1473
alfa-L-rhamnosidase.
  
  
 0.402
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.