STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptcCCellobiose-specific PTS IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (441 aa)    
Predicted Functional Partners:
LBA0877
Cellobiose PTS, EIIA.
 
 
 0.978
LBA0876
Cellobiose-specific PTS IIC.
 
 
 0.974
ptsH
Phosphocarrier protein HPr; PthP; COG1925 Phosphotransferase system, HPr-related protein.
    
  0.903
LBA0617
ATP-dependent RNA helicase, DEAD-DEAH box.
       0.787
LBA0616
Hypothetical protein; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
       0.785
LBA0225
6-p-beta-glucosidase; 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.782
LBA0726
Phospho-beta-galactosidase II; COG2723 Beta-glucosidase-6-phospho-beta-glucosidase -beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.782
LBA0874
Phospho-beta-galactosidase I; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.782
LBA0881
Phospho-beta-glucosidase; COG2723 Beta-glucosidase-6-phospho-beta-glucosidase-beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.782
LBA0885
COG2723 Beta-glucosidase-6-phospho-beta-glucosidase -beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.782
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.