Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LBA0750Alkaline phosphatase famliy. (725 aa)    
Predicted Functional Partners:
LBA0447
Phosphoglycerol transferase.
  
 
 
0.911
LBA0740
Putative modification methylase; COG0827 Adenine-specific DNA methylase.
  
     0.695
LBA0971
Putative O-linked transferase; GlcNAc; hypothetical protein.
 
  
 0.663
LBA0976
COG4479 Uncharacterized protein conserved in bacteria; Belongs to the UPF0346 family.
 
     0.653
LBA0534
Transcriptional regulator.
 
   
 0.603
vanZ
Putative membrane protein; VanZ.
       0.599
LBA0424
Hypothetical protein.
 
     0.592
htrA
Putative heat shock related serine protease; HtrA; Serine protease do-like HtrA.
     
 0.541
ppnk
Putative inorganic polyphosphate-ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
 
  0.520
ftsQ
Cell division protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
    0.499
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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