STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0838Competence protein; ComEA. (227 aa)    
Predicted Functional Partners:
LBA0839
Competence protein; ComEC.
 
  
 0.965
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.930
LBA0837
Hypothetical protein.
      0.908
LBA0840
Putative DNA polymerase III, delta subunit.
     
 0.865
ftsW
Cell division protein; FtsW; Belongs to the SEDS family.
  
  
 0.825
LBA0670
Competence protein; ComFA; ComF1.
   
  
 0.801
LBA0835
Hypothetical protein; COG0742 N6-adenine-specific methylase.
       0.789
cglA
Competence protein; CglA.
 
  
 0.770
LBA0735
Competence protein; ComGB.
  
  
 0.721
LBA0286
Type 4 prepilin-like protein leader peptide processing enzyme.
 
  
 0.701
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.