Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LBA0879Cellobiose-specific PTS IIC. (256 aa)    
Predicted Functional Partners:
LBA0877
Cellobiose PTS, EIIA.
 
 
 0.985
LBA0876
Cellobiose-specific PTS IIC.
 
 
 0.983
ptsH
Phosphocarrier protein HPr; PthP; COG1925 Phosphotransferase system, HPr-related protein.
    
 0.923
LBA0878
Hypothetical protein.
 
  
 0.915
LBA0874
Phospho-beta-galactosidase I; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.813
LBA0225
6-p-beta-glucosidase; 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.783
LBA0726
Phospho-beta-galactosidase II; COG2723 Beta-glucosidase-6-phospho-beta-glucosidase -beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.783
LBA0881
Phospho-beta-glucosidase; COG2723 Beta-glucosidase-6-phospho-beta-glucosidase-beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.783
LBA0885
COG2723 Beta-glucosidase-6-phospho-beta-glucosidase -beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.783
LBA1366
Beta-glucosidase family protein; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.783
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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