Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LBA0341 | LBA0698 | LBA0341 | LBA0698 | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.697 |
LBA0341 | eno | LBA0341 | LBA0889 | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.973 |
LBA0341 | fbaA | LBA0341 | LBA1599 | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | COG0191 Fructose-tagatose bisphosphate aldolase. | 0.909 |
LBA0341 | gpmA | LBA0341 | LBA0185 | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.903 |
LBA0341 | kpyK | LBA0341 | LBA0957 | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | 0.641 |
LBA0341 | pgi | LBA0341 | LBA0752 | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | COG0166 Glucose-6-phosphate isomerase. | 0.928 |
LBA0341 | pgk | LBA0341 | LBA0699 | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | COG0126 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.972 |
LBA0341 | tpiA | LBA0341 | LBA0700 | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.767 |
LBA0466 | LBA0698 | LBA0466 | LBA0698 | Hypothetical protein. | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.654 |
LBA0466 | eno | LBA0466 | LBA0889 | Hypothetical protein. | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.935 |
LBA0466 | kpyK | LBA0466 | LBA0957 | Hypothetical protein. | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | 0.954 |
LBA0466 | ppc | LBA0466 | LBA1092 | Hypothetical protein. | Phosphoenolpyruvate carboxylase Ppc; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.929 |
LBA0698 | LBA0341 | LBA0698 | LBA0341 | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Pga mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.697 |
LBA0698 | LBA0466 | LBA0698 | LBA0466 | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Hypothetical protein. | 0.654 |
LBA0698 | eno | LBA0698 | LBA0889 | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.977 |
LBA0698 | fbaA | LBA0698 | LBA1599 | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | COG0191 Fructose-tagatose bisphosphate aldolase. | 0.989 |
LBA0698 | gpmA | LBA0698 | LBA0185 | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.847 |
LBA0698 | kpyK | LBA0698 | LBA0957 | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | 0.952 |
LBA0698 | pgi | LBA0698 | LBA0752 | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | COG0166 Glucose-6-phosphate isomerase. | 0.970 |
LBA0698 | pgk | LBA0698 | LBA0699 | COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | COG0126 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.999 |
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