STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA0943COG0531 Amino acid transporters. (398 aa)    
Predicted Functional Partners:
LBA0698
COG0057 Glyceraldehyde-3-phosphate dehydrogenase-erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.558
LBA0264
Glucan 1,6-alpha-glucosidase; COG0366 Glycosidases.
  
 0.475
gtfA
Sucrose phosphorylase; GtfA.
  
 0.475
LBA0686
Amylopullulanase.
  
 0.475
treC
Trehalose 6-P hydrolase.
  
 0.475
LBA1437
Sucrose phosphorylase.
  
 0.475
LBA1871
Neopullulanase; COG0366 Glycosidases.
  
 0.475
LBA1872
Oligo-1,6-glucosidase; COG0366 Glycosidases.
  
 0.475
LBA0945
Alkaline phosphatase; COG0586 Uncharacterized membrane-associated protein.
       0.419
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.