STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1017Putative mucus binding protein; Potential frameshift to 1019. (294 aa)    
Predicted Functional Partners:
LBA1016
Putative mucus binding protein; Potential frameshift to 1019.
     
0.940
LBA1709
Mucus binding protein precursor Mub.
 
     0.741
LBA1609
Putative mucus binding protein precursor.
 
     0.715
LBA1019
Putative mucus binding protein; Potential frameshift to 1016.
 
     0.707
LBA0909
Putative mucus binding precursor.
 
     0.702
LBA1020
Putative mucus binding protein.
 
     0.692
LBA1103
Putative flavodoxin; Potential frameshift to 1105; Flavodoxin.
 
     0.559
LBA1136
Transcriptional regulator.
  
   
 0.544
LBA1460
Putative mucus binding protein precursor; Cell surface protein precursor.
 
   
 0.529
LBA1633
Surface protein.
   
 0.492
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.