STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1042Glutamine ABC transporter membrane spanning permease. (219 aa)    
Predicted Functional Partners:
LBA1045
Glutamine ABC transporter ATP-binding protein.
 0.998
LBA1046
Glutamine ABC transporter substrate-binding protein; Putative ATP-binding cassette transport system similar to substrate binding protein and to components of ABC transporter ORF J.
 0.996
LBA1044
ABC transporter.
 
  
 
0.932
LBA0111
Putative glutamate ATP binding protein.
 
 0.818
glnQ
Glutamine ABC transporter ATP-binding protein; GlnQ.
 
 0.818
glnQ-2
Glutamine ABC transporter ATP-binding protein; GlnQ.
 
 0.782
glnH
Glutamine ABC transporter; Glutaminebinding protein.
 
 0.746
glnQ-3
Glutamine ABC transporter; GlnQ.
 
 0.744
LBA1672
Amino acid ABC transporter.
 
 0.697
LBA0112
Putative glutamine ABC transporter.
 
0.594
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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