STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1060Hypothetical protein. (160 aa)    
Predicted Functional Partners:
LBA1058
Hypothetical protein.
 
    0.808
LBA1059
Putative ribosomal-protein-serine N-acetyltransferase.
  
    0.783
LBA1057
HIT-like protein.
     
 0.775
LBA0489
Serine-threonine protein phosphatase.
  
 0.598
ftsK
Putative cell division protein; FtsK; hypothetical protein.
 
    0.592
ftsK-2
Putative cell division protein; FtsK; hypothetical protein.
 
    0.543
LBA1056
Hypothetical protein; Cation efflux system (zinc-cadmium).
       0.518
LBA0594
ABC transporter ATP-binding and membrane spanning permease.
 
  
 0.501
LBA1285
Hypothetical protein.
 
    0.457
acpP
Carrier protein ACP; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.446
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.