STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1075Malolactic enzyme. (541 aa)    
Predicted Functional Partners:
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.967
ldh1
L-LDH; Catalyzes the conversion of lactate to pyruvate.
  
 0.933
citH
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
 0.933
LBA1516
L-LDH; COG0039 Malate-lactate dehydrogenases; Belongs to the LDH/MDH superfamily.
  
 0.933
lysR-6
Malolactic regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.840
kpyK
Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family.
  
 
 0.839
LBA0568
COG0679 Predicted permeases.
  
  
 0.786
LBA1274
Cyclopropane-fatty-acyl-phospholipid synthase.
      
 0.687
LBA0367
Putative receptor; COG0679 Predicted permeases.
  
  
 0.651
LBA0466
Hypothetical protein.
  
  
 0.640
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.