Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LBA0466 | eno | LBA0466 | LBA0889 | Hypothetical protein. | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.935 |
LBA0466 | kpyK | LBA0466 | LBA0957 | Hypothetical protein. | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | 0.954 |
LBA0466 | ppc | LBA0466 | LBA1092 | Hypothetical protein. | Phosphoenolpyruvate carboxylase Ppc; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.929 |
LBA1695 | metK | LBA1695 | LBA1080 | Aspartate aminotransferase. | Putative methionine synthase; MetE. | 0.589 |
LBA1695 | pepD | LBA1695 | LBA0994 | Aspartate aminotransferase. | Aminoacyl-histidine dipeptidase; PepD; carnosinase. | 0.425 |
LBA1695 | ppc | LBA1695 | LBA1092 | Aspartate aminotransferase. | Phosphoenolpyruvate carboxylase Ppc; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.578 |
eno | LBA0466 | LBA0889 | LBA0466 | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Hypothetical protein. | 0.935 |
eno | kpyK | LBA0889 | LBA0957 | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | 0.999 |
eno | pepN | LBA0889 | LBA1849 | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Aminopeptidase N. | 0.418 |
eno | ppc | LBA0889 | LBA1092 | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoenolpyruvate carboxylase Ppc; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.935 |
eno | tpiA | LBA0889 | LBA0700 | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.982 |
kpyK | LBA0466 | LBA0957 | LBA0466 | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | Hypothetical protein. | 0.954 |
kpyK | eno | LBA0957 | LBA0889 | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | 2-phosphoglycerate dehydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.999 |
kpyK | ppc | LBA0957 | LBA1092 | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate carboxylase Ppc; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.936 |
kpyK | tpiA | LBA0957 | LBA0700 | Pyruvate kinase; COG3848 Phosphohistidine swiveling domain; Belongs to the pyruvate kinase family. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.923 |
metK | LBA1695 | LBA1080 | LBA1695 | Putative methionine synthase; MetE. | Aspartate aminotransferase. | 0.589 |
metK | pepD | LBA1080 | LBA0994 | Putative methionine synthase; MetE. | Aminoacyl-histidine dipeptidase; PepD; carnosinase. | 0.438 |
metK | ppc | LBA1080 | LBA1092 | Putative methionine synthase; MetE. | Phosphoenolpyruvate carboxylase Ppc; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.586 |
pepD | LBA1695 | LBA0994 | LBA1695 | Aminoacyl-histidine dipeptidase; PepD; carnosinase. | Aspartate aminotransferase. | 0.425 |
pepD | metK | LBA0994 | LBA1080 | Aminoacyl-histidine dipeptidase; PepD; carnosinase. | Putative methionine synthase; MetE. | 0.438 |
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