Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBA1102Transmembrane protein. (280 aa)    
Predicted Functional Partners:
LBA0361
ABC transporter; Substrate binding protein; phosphate-binding protein.
     
 0.870
LBA0904
OM lipoprotein precursor; Belongs to the nlpA lipoprotein family.
     
 0.859
LBA1395
Outer membrane lipoprotein precursor; Belongs to the nlpA lipoprotein family.
     
 0.859
LBA1046
Glutamine ABC transporter substrate-binding protein; Putative ATP-binding cassette transport system similar to substrate binding protein and to components of ABC transporter ORF J.
      
 0.855
LBA1672
Amino acid ABC transporter.
      
 0.855
ptsI
P-enolpyruvate-protein p-transferase PTSI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
     
 0.833
crcB
Putative membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
      
 0.781
crcB-2
Membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
      
 0.781
rbsD
Ribose permease; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.526
fbaA
COG0191 Fructose-tagatose bisphosphate aldolase.
     
 0.493
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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