STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1284Putative cell division protein. (582 aa)    
Predicted Functional Partners:
LBA1285
Hypothetical protein.
 
     0.788
LBA1283
Glycosil transferase.
  
    0.785
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.582
LBA1581
Thioredoxin.
  
 0.548
LBA1901
Thioredoxin 2.
  
 0.548
LBA1461
Putative regulator.
 
     0.540
msrA-2
Peptide methionine sulfoxide reductase.
  
  
 0.493
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.479
LBA1281
Putative acyl-CoA thioesterase.
     
 0.472
LBA0373
Hypothetical protein.
   
    0.451
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.