rpmB protein (Lactobacillus acidophilus) - STRING interaction network

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rpmB

Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (61 aa)

Predicted Functional Partners:

LBA0842

0.978

rpsT

0.977

rpmF

0.977

rplU

0.977

rpmG

0.977

rplS

0.976

rpsF

0.974

rpsR

0.974

rpmE2

0.974

rplM

0.974

Your Current Organism:

Lactobacillus acidophilus

NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LBA0842	rplM	LBA0842	LBA0323	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.978
LBA0842	rplS	LBA0842	LBA1286	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.975
LBA0842	rplU	LBA0842	LBA1338	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	50s ribosomal protein RL21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.968
LBA0842	rpmB	LBA0842	LBA1312	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.978
LBA0842	rpmE2	LBA0842	LBA0265	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	COG0254 Ribosomal protein L31.	0.972
LBA0842	rpmF	LBA0842	LBA0952	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.975
LBA0842	rpmG	LBA0842	LBA1508	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	50s ribosomal protein RL33; Belongs to the bacterial ribosomal protein bL33 family.	0.972
LBA0842	rpsF	LBA0842	LBA0007	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
LBA0842	rpsR	LBA0842	LBA0009	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	30S Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.971
LBA0842	rpsT	LBA0842	LBA0841	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.992
rplM	LBA0842	LBA0323	LBA0842	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 30S ribosomal protein S15; RpsO; Belongs to the universal ribosomal protein uS15 family.	0.978
rplM	rplS	LBA0323	LBA1286	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.988
rplM	rplU	LBA0323	LBA1338	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50s ribosomal protein RL21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.977
rplM	rpmB	LBA0323	LBA1312	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.974
rplM	rpmE2	LBA0323	LBA0265	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0254 Ribosomal protein L31.	0.974
rplM	rpmF	LBA0323	LBA0952	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.971
rplM	rpmG	LBA0323	LBA1508	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50s ribosomal protein RL33; Belongs to the bacterial ribosomal protein bL33 family.	0.974
rplM	rpsF	LBA0323	LBA0007	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.974
rplM	rpsR	LBA0323	LBA0009	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.979
rplM	rpsT	LBA0323	LBA0841	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.976

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