STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBA1395Outer membrane lipoprotein precursor; Belongs to the nlpA lipoprotein family. (283 aa)    
Predicted Functional Partners:
LBA0906
ABC transporter -permease protein.
 0.998
metN
ABC transporter ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.995
LBA1046
Glutamine ABC transporter substrate-binding protein; Putative ATP-binding cassette transport system similar to substrate binding protein and to components of ABC transporter ORF J.
 
  
 0.956
LBA0904
OM lipoprotein precursor; Belongs to the nlpA lipoprotein family.
  
  
 
0.901
LBA0361
ABC transporter; Substrate binding protein; phosphate-binding protein.
      
 0.892
LBA1102
Transmembrane protein.
      
 0.884
LBA1376
Transmembrane protein.
      
 0.884
LBA0469
Hypothetical protein.
  
 
 0.841
LBA1672
Amino acid ABC transporter.
  
  
 0.841
clpC
ATPase; ClpC; Belongs to the ClpA/ClpB family.
     
 0.525
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.